miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|112356727|gb|AM391974.1|AM391974 CTCATAGTTTCTAAAAAAAATNNNGATTAATCTATACTCTTCAACAATGTCATCATCATCATCATCTTACTTGAGAGATG
AAGATCTGACACAAGAAACAAGAGATCTGATCTCTTCTCTTCCAAGCGAGAAAGGTTGGTTGGTGAGCCAAATGTATCAG
TTTCAAGGACGTTGGCACACACAAGCCCTCTTACAAGGACTCTTGCAATACCAAAAACACTTTGAGGCCAAAGATTCCGA
CATTATCCTCGTCACCAATCCTAAATCAGGTACCACTTGGTTAAAAGCTCTTGTCTTTTCTCTCATTAACCGACACAAGT
TTCCAGTTTCTTCTGGTGATCATCCTCTTCTTGTTACCAATCCGCACCTTCTCATACCCTTCTTGGAAGGAGTTTACTAC
GAGTCTCCAAATTTCGATTTCACTGAGTTGCCTTCTCCAAGACTCATGAACACACACATATCGCTTCTTTCCCTGCCCGA
GTCCGTTAAGAGCTCCTCTTGTAAGATTGTGTATTGTTGTAGGAACCCTAAGGACATGTTTGTGTCCTTATGGCATTTTG
GAAAGAAACTTGCTTCTCA




Most similar to sp|P52839|FSTL_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P52839|FSTL_ARATH Flavonol sulfotransferase-like OS=Arabidopsis
           thaliana GN=At2g03760 PE=1 SV=2
          Length = 326

 Score =  310 bits (794), Expect = 4e-84
 Identities = 149/170 (87%), Positives = 160/170 (94%), Gaps = 1/170 (0%)
 Frame = +2

Query: 68  YLRDEDLTQETRDLISSLPSEKGWLVSQMYQFQGRWHTQALLQGLLQYQKHFEAKDSDII 247
           YL DEDLTQETR LISSLP EKGWLVS++Y+FQG WHTQA+LQG+L  QK FEAKDSDII
Sbjct: 10  YLGDEDLTQETRALISSLPKEKGWLVSEIYEFQGLWHTQAILQGILICQKRFEAKDSDII 69

Query: 248 LVTNPKSGTTWLKALVFSLINRHKFPVSS-GDHPLLVTNPHLLIPFLEGVYYESPNFDFT 424
           LVTNPKSGTTWLKALVF+L+NRHKFPVSS G+HPLLVTNPHLL+PFLEGVYYESP+FDF+
Sbjct: 70  LVTNPKSGTTWLKALVFALLNRHKFPVSSSGNHPLLVTNPHLLVPFLEGVYYESPDFDFS 129

Query: 425 ELPSPRLMNTHISLLSLPESVKSSSCKIVYCCRNPKDMFVSLWHFGKKLA 574
            LPSPRLMNTHIS LSLPESVKSSSCKIVYCCRNPKDMFVSLWHFGKKLA
Sbjct: 130 SLPSPRLMNTHISHLSLPESVKSSSCKIVYCCRNPKDMFVSLWHFGKKLA 179